Dynamical behavior of molecular motor assemblies in the rigid and crossbridge models.
نویسندگان
چکیده
We present a detailed analysis of the dynamical instabilities appearing in two kinetic theories for the collective behavior of molecular motors: the rigid two-state model and the two-state crossbridge (or power-stroke) model with continuous binding sites. We calculate force-velocity relations, discuss their stability, plot a diagram that summarizes the oscillation regimes, identify the location of the Hopf bifurcation with a memory effect, discuss the oscillation frequency and make a link with single-molecule experiments. We show that the instabilities present in these models naturally translate into non-linearities in force-displacement relations, and at linear order give forces that are similar to the delayed stretch activation observed in oscillating muscles. We also find that instabilities can appear for both apparent load-decelerated and load-accelerated detachment rates in a 3-state crossbridge model.
منابع مشابه
Dynamical Behavior of a Rigid Body with One Fixed Point (Gyroscope). Basic Concepts and Results. Open Problems: a Review
The study of the dynamic behavior of a rigid body with one fixed point (gyroscope) has a long history. A number of famous mathematicians and mechanical engineers have devoted enormous time and effort to clarify the role of dynamic effects on its movement (behavior) – stable, periodic, quasi-periodic or chaotic. The main objectives of this review are: 1) to outline the characteristic features of...
متن کاملPreload Effect on Nonlinear Dynamic Behavior of Aerodynamic Two-Lobe Journal Bearings
This paper presents the effect of preload on nonlinear dynamic behavior of a rigid rotor supported by two-lobe aerodynamic noncircular journal bearing. A finite element method is employed to solve the Reynolds equation in static and dynamical states and the dynamical equations are solved using Runge-Kutta method. To analyze the behavior of the rotor center in the horizontal and vertical directi...
متن کاملInvestigation of Dynamical Behavior (Transverse Vibration) and Instability Analysis of Carbon Nanotubes Conveying Nanofluid
This work focuses on the dynamical behavior of carbon nanotubes, including vibration, wave propagation and fluid-structure interaction. In the present research, transverse vibration of nano fluid conveying carbon nanotubes is investigated. To this end, based on the nonlocal and strain-inertia gradient continuum elasticity theories and by using rod and Euler-Bernoulli beam models, the system’s d...
متن کاملA new reduced mathematical model to simulate the action potential in end plate of skeletal muscle fibers
Usually mathematicians use Hodgkin-Huxley model or FitzHug-Nagumo model to simulate action potentials of skeletal muscle fibers. These models are electrically excitable, but skeletal muscle fibers are stimulated chemically. To investigate skeletal muscle fibers we use a model with six ordinary differential equations. This dynamical system is sensitive to initial value of some variables so it is...
متن کاملDynamical distance as a semi-metric on nuclear conguration space
In this paper, we introduce the concept of dynamical distance on a nuclear conguration space. We partition the nuclear conguration space into disjoint classes. This classification coincides with the classical partitioning of molecular systems via the concept of conjugacy of dynamical systems. It gives a quantitative criterion to distinguish dierent molecular structures.
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- The European physical journal. E, Soft matter
دوره 34 6 شماره
صفحات -
تاریخ انتشار 2011